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The present work investigates turbulent flow structures and behavior near the leading edge of a longitudinal flow obstruction in an open channel with an inclined bank. A volumetric particle image velocimetry (VPIV) was employed to collect velocity data. The results indicate that a relatively moderate channel bank angle (θ=28∘) does not prevent the formation of a junction vortex (JV) system. Indeed, it is found that the JV system develops over the channel bank and extends to the leading edge of the flow obstruction. It is demonstrated that the main factor that strengthens the primary junction vortex (JV1) at the tip of the protrusion is the pronounced downward flow. The probability density functions (pdfs) of the velocity fluctuations specify that the JV1 oscillates aperiodically between the so-called zero-flow and back flow modes. This explains the amplification of TKE at its core. It is shown that the velocity difference between the peaks of the pdf increases from over the channel bank towards the tip of the flow obstruction. The aperiodic behavior of the JV1 is confirmed via the proper orthogonal decomposition (POD) technique. Specifically, it is demonstrated that the leading POD modes, associated with the JV system, contain lower energy content compared to periodic flows. The time-averaged vertical vorticity field verifies the presence of a tornado like vortex structure near the upstream face of the retaining wall. Finally, the results suggest that the largest bed shear stress values in the mean flow are located near the tip of the protrusion.